orbitrap hcd ms2 scans Search Results


cid or hcd  (MassMatrix Inc)
90
MassMatrix Inc cid or hcd
Software tools for MS-based disulfide bond identification
Cid Or Hcd, supplied by MassMatrix Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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qexactive hf mass spectrometer  (Thermo Fisher)
90
Thermo Fisher qexactive hf mass spectrometer
<t>MS2</t> <t>(HCD)</t> spectra of chromatographically separated copper chlorophylls shown in Fig. 2. (A.) Cu pyropheophorbide a, 3.7 min (parent molecular ion (M+H)+ m/z 596.1832, 100% = 2.6E4); (B.) Cu 152-Me-phytyl rhodin g7, 6.7 min ((M+H)+ m/z 964.4756, 100% = 1.2E4); (C.) Cu 152-Me-phytyl chlorin e6, 10.8 min ((M+H)+ m/z 950.4975, 100% = 4.3E4); (D.) Cu pheophytin a, 14.9 min ((M+H)+ m/z 932.4873, 100% = 4.0E4); (E.) Cu 152-Me-phytyl isochlorin e4, 17.6 min ((M+H)+ m/z 906.5047, 100% = 3.6E4); (F.) Cu pyropheophytin a, 21.2 min ((M+H)+ m/z 874.4809, 100% = 5.3E4). Isolation width 0.4 m/z; collision energy spread 30, 35, 40; resolving power 60,000. HCD spectra for these and other compounds are presented as Supplementary material. Raw MS Data file: C(L).raw.
Qexactive Hf Mass Spectrometer, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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qexactive hf  (Thermo Fisher)
90
Thermo Fisher qexactive hf
<t>MS2</t> <t>(HCD)</t> spectra of chromatographically separated copper chlorophylls shown in Fig. 2. (A.) Cu pyropheophorbide a, 3.7 min (parent molecular ion (M+H)+ m/z 596.1832, 100% = 2.6E4); (B.) Cu 152-Me-phytyl rhodin g7, 6.7 min ((M+H)+ m/z 964.4756, 100% = 1.2E4); (C.) Cu 152-Me-phytyl chlorin e6, 10.8 min ((M+H)+ m/z 950.4975, 100% = 4.3E4); (D.) Cu pheophytin a, 14.9 min ((M+H)+ m/z 932.4873, 100% = 4.0E4); (E.) Cu 152-Me-phytyl isochlorin e4, 17.6 min ((M+H)+ m/z 906.5047, 100% = 3.6E4); (F.) Cu pyropheophytin a, 21.2 min ((M+H)+ m/z 874.4809, 100% = 5.3E4). Isolation width 0.4 m/z; collision energy spread 30, 35, 40; resolving power 60,000. HCD spectra for these and other compounds are presented as Supplementary material. Raw MS Data file: C(L).raw.
Qexactive Hf, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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cid-ms2-hcd-ms3 method  (Nature Biotechnology)
90
Nature Biotechnology cid-ms2-hcd-ms3 method
<t>MS2</t> <t>(HCD)</t> spectra of chromatographically separated copper chlorophylls shown in Fig. 2. (A.) Cu pyropheophorbide a, 3.7 min (parent molecular ion (M+H)+ m/z 596.1832, 100% = 2.6E4); (B.) Cu 152-Me-phytyl rhodin g7, 6.7 min ((M+H)+ m/z 964.4756, 100% = 1.2E4); (C.) Cu 152-Me-phytyl chlorin e6, 10.8 min ((M+H)+ m/z 950.4975, 100% = 4.3E4); (D.) Cu pheophytin a, 14.9 min ((M+H)+ m/z 932.4873, 100% = 4.0E4); (E.) Cu 152-Me-phytyl isochlorin e4, 17.6 min ((M+H)+ m/z 906.5047, 100% = 3.6E4); (F.) Cu pyropheophytin a, 21.2 min ((M+H)+ m/z 874.4809, 100% = 5.3E4). Isolation width 0.4 m/z; collision energy spread 30, 35, 40; resolving power 60,000. HCD spectra for these and other compounds are presented as Supplementary material. Raw MS Data file: C(L).raw.
Cid Ms2 Hcd Ms3 Method, supplied by Nature Biotechnology, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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orbitrap hcd ms2 scans  (Thermo Fisher)
90
Thermo Fisher orbitrap hcd ms2 scans
<t>MS2</t> <t>(HCD)</t> spectra of chromatographically separated copper chlorophylls shown in Fig. 2. (A.) Cu pyropheophorbide a, 3.7 min (parent molecular ion (M+H)+ m/z 596.1832, 100% = 2.6E4); (B.) Cu 152-Me-phytyl rhodin g7, 6.7 min ((M+H)+ m/z 964.4756, 100% = 1.2E4); (C.) Cu 152-Me-phytyl chlorin e6, 10.8 min ((M+H)+ m/z 950.4975, 100% = 4.3E4); (D.) Cu pheophytin a, 14.9 min ((M+H)+ m/z 932.4873, 100% = 4.0E4); (E.) Cu 152-Me-phytyl isochlorin e4, 17.6 min ((M+H)+ m/z 906.5047, 100% = 3.6E4); (F.) Cu pyropheophytin a, 21.2 min ((M+H)+ m/z 874.4809, 100% = 5.3E4). Isolation width 0.4 m/z; collision energy spread 30, 35, 40; resolving power 60,000. HCD spectra for these and other compounds are presented as Supplementary material. Raw MS Data file: C(L).raw.
Orbitrap Hcd Ms2 Scans, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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cid-ot ms2-hcd-ion trap (it) ms3 data acquisition scheme  (Thermo Fisher)
90
Thermo Fisher cid-ot ms2-hcd-ion trap (it) ms3 data acquisition scheme
<t>MS2</t> <t>(HCD)</t> spectra of chromatographically separated copper chlorophylls shown in Fig. 2. (A.) Cu pyropheophorbide a, 3.7 min (parent molecular ion (M+H)+ m/z 596.1832, 100% = 2.6E4); (B.) Cu 152-Me-phytyl rhodin g7, 6.7 min ((M+H)+ m/z 964.4756, 100% = 1.2E4); (C.) Cu 152-Me-phytyl chlorin e6, 10.8 min ((M+H)+ m/z 950.4975, 100% = 4.3E4); (D.) Cu pheophytin a, 14.9 min ((M+H)+ m/z 932.4873, 100% = 4.0E4); (E.) Cu 152-Me-phytyl isochlorin e4, 17.6 min ((M+H)+ m/z 906.5047, 100% = 3.6E4); (F.) Cu pyropheophytin a, 21.2 min ((M+H)+ m/z 874.4809, 100% = 5.3E4). Isolation width 0.4 m/z; collision energy spread 30, 35, 40; resolving power 60,000. HCD spectra for these and other compounds are presented as Supplementary material. Raw MS Data file: C(L).raw.
Cid Ot Ms2 Hcd Ion Trap (It) Ms3 Data Acquisition Scheme, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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collision dissociation fragmentation cell  (High Energy Corporation)
90
High Energy Corporation collision dissociation fragmentation cell
<t>MS2</t> <t>(HCD)</t> spectra of chromatographically separated copper chlorophylls shown in Fig. 2. (A.) Cu pyropheophorbide a, 3.7 min (parent molecular ion (M+H)+ m/z 596.1832, 100% = 2.6E4); (B.) Cu 152-Me-phytyl rhodin g7, 6.7 min ((M+H)+ m/z 964.4756, 100% = 1.2E4); (C.) Cu 152-Me-phytyl chlorin e6, 10.8 min ((M+H)+ m/z 950.4975, 100% = 4.3E4); (D.) Cu pheophytin a, 14.9 min ((M+H)+ m/z 932.4873, 100% = 4.0E4); (E.) Cu 152-Me-phytyl isochlorin e4, 17.6 min ((M+H)+ m/z 906.5047, 100% = 3.6E4); (F.) Cu pyropheophytin a, 21.2 min ((M+H)+ m/z 874.4809, 100% = 5.3E4). Isolation width 0.4 m/z; collision energy spread 30, 35, 40; resolving power 60,000. HCD spectra for these and other compounds are presented as Supplementary material. Raw MS Data file: C(L).raw.
Collision Dissociation Fragmentation Cell, supplied by High Energy Corporation, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Image Search Results


Software tools for MS-based disulfide bond identification

Journal: Biophysics Reports

Article Title: Mapping disulfide bonds from sub-micrograms of purified proteins or micrograms of complex protein mixtures

doi: 10.1007/s41048-018-0050-6

Figure Lengend Snippet: Software tools for MS-based disulfide bond identification

Article Snippet: MassMatrix , CID or HCD , CID or HCD MS2 , A: Complex forms of disulfide bonds are taken into consideration; L: Only for low-complexity samples digested using specific proteases , Xu et al . ( ) .

Techniques: Software, Control, Labeling

Troubleshooting table

Journal: Biophysics Reports

Article Title: Mapping disulfide bonds from sub-micrograms of purified proteins or micrograms of complex protein mixtures

doi: 10.1007/s41048-018-0050-6

Figure Lengend Snippet: Troubleshooting table

Article Snippet: MassMatrix , CID or HCD , CID or HCD MS2 , A: Complex forms of disulfide bonds are taken into consideration; L: Only for low-complexity samples digested using specific proteases , Xu et al . ( ) .

Techniques: Modification

MS2 (HCD) spectra of chromatographically separated copper chlorophylls shown in Fig. 2. (A.) Cu pyropheophorbide a, 3.7 min (parent molecular ion (M+H)+ m/z 596.1832, 100% = 2.6E4); (B.) Cu 152-Me-phytyl rhodin g7, 6.7 min ((M+H)+ m/z 964.4756, 100% = 1.2E4); (C.) Cu 152-Me-phytyl chlorin e6, 10.8 min ((M+H)+ m/z 950.4975, 100% = 4.3E4); (D.) Cu pheophytin a, 14.9 min ((M+H)+ m/z 932.4873, 100% = 4.0E4); (E.) Cu 152-Me-phytyl isochlorin e4, 17.6 min ((M+H)+ m/z 906.5047, 100% = 3.6E4); (F.) Cu pyropheophytin a, 21.2 min ((M+H)+ m/z 874.4809, 100% = 5.3E4). Isolation width 0.4 m/z; collision energy spread 30, 35, 40; resolving power 60,000. HCD spectra for these and other compounds are presented as Supplementary material. Raw MS Data file: C(L).raw.

Journal: Data in Brief

Article Title: High resolution mass spectral data from the analysis of copper chlorophylls and copper chlorophyll degradation products in bright green table olives

doi: 10.1016/j.dib.2020.105548

Figure Lengend Snippet: MS2 (HCD) spectra of chromatographically separated copper chlorophylls shown in Fig. 2. (A.) Cu pyropheophorbide a, 3.7 min (parent molecular ion (M+H)+ m/z 596.1832, 100% = 2.6E4); (B.) Cu 152-Me-phytyl rhodin g7, 6.7 min ((M+H)+ m/z 964.4756, 100% = 1.2E4); (C.) Cu 152-Me-phytyl chlorin e6, 10.8 min ((M+H)+ m/z 950.4975, 100% = 4.3E4); (D.) Cu pheophytin a, 14.9 min ((M+H)+ m/z 932.4873, 100% = 4.0E4); (E.) Cu 152-Me-phytyl isochlorin e4, 17.6 min ((M+H)+ m/z 906.5047, 100% = 3.6E4); (F.) Cu pyropheophytin a, 21.2 min ((M+H)+ m/z 874.4809, 100% = 5.3E4). Isolation width 0.4 m/z; collision energy spread 30, 35, 40; resolving power 60,000. HCD spectra for these and other compounds are presented as Supplementary material. Raw MS Data file: C(L).raw.

Article Snippet: How data were acquired , Positive electrospray ionization UHPLC-MS1 and higher-energy collisional dissociation (HCD) tandem (MS2) mass spectrometry, Thermo Scientific QExactive HF mass spectrometer, Xcalibur Software (version 3.0.63).

Techniques: Isolation

MS2 (HCD) spectra of chromatographically separated copper chlorophyllins shown in Fig. 5. (A.) chlorin e6, 2.7 min (parent molecular ion (M+H)+ m/z 597.2700, 100% = 4.7E4); (B.) 152-Me rhodin g7, 3.6 min ((M+H)+ m/z 625.2651, 100% = 2.8E4); (C.) 152-Me chlorin e6, 4.5 min ((M+H)+ m/z 611.2857, 100% = 1.1E5); (D.) Cu 152-Me chlorin e6, 7.6 min (M.+ m/z 671.1919, 100% = 2.6E4); (E.) Cu isochlorin e4, 9.7 min (M.+ m/z 613.1860, 100% = 4.8E4); (F.) Cu 152-Me chlorin e4, 13.9 min (M.+ m/z 627.2016, 100% = 7.7E3). Labels (m/z) were rounded down to accommodate space limitations. HCD spectra for these and other compounds are presented as Supplementary material. For A-D, E.: Isolation width 0.4 m/z; collision energy spread 30, 35, 40; resolving power 60,000. For F.: Isolation width 0.4 m/z; collision energy spread 35, 40, 45; resolving power 240,000. Raw MS Data files: (A-D.) C(H).raw; (E.) D(H).raw; (F.) G(H).raw.

Journal: Data in Brief

Article Title: High resolution mass spectral data from the analysis of copper chlorophylls and copper chlorophyll degradation products in bright green table olives

doi: 10.1016/j.dib.2020.105548

Figure Lengend Snippet: MS2 (HCD) spectra of chromatographically separated copper chlorophyllins shown in Fig. 5. (A.) chlorin e6, 2.7 min (parent molecular ion (M+H)+ m/z 597.2700, 100% = 4.7E4); (B.) 152-Me rhodin g7, 3.6 min ((M+H)+ m/z 625.2651, 100% = 2.8E4); (C.) 152-Me chlorin e6, 4.5 min ((M+H)+ m/z 611.2857, 100% = 1.1E5); (D.) Cu 152-Me chlorin e6, 7.6 min (M.+ m/z 671.1919, 100% = 2.6E4); (E.) Cu isochlorin e4, 9.7 min (M.+ m/z 613.1860, 100% = 4.8E4); (F.) Cu 152-Me chlorin e4, 13.9 min (M.+ m/z 627.2016, 100% = 7.7E3). Labels (m/z) were rounded down to accommodate space limitations. HCD spectra for these and other compounds are presented as Supplementary material. For A-D, E.: Isolation width 0.4 m/z; collision energy spread 30, 35, 40; resolving power 60,000. For F.: Isolation width 0.4 m/z; collision energy spread 35, 40, 45; resolving power 240,000. Raw MS Data files: (A-D.) C(H).raw; (E.) D(H).raw; (F.) G(H).raw.

Article Snippet: How data were acquired , Positive electrospray ionization UHPLC-MS1 and higher-energy collisional dissociation (HCD) tandem (MS2) mass spectrometry, Thermo Scientific QExactive HF mass spectrometer, Xcalibur Software (version 3.0.63).

Techniques: Isolation

Journal: Data in Brief

Article Title: High resolution mass spectral data from the analysis of copper chlorophylls and copper chlorophyll degradation products in bright green table olives

doi: 10.1016/j.dib.2020.105548

Figure Lengend Snippet:

Article Snippet: How data were acquired , Positive electrospray ionization UHPLC-MS1 and higher-energy collisional dissociation (HCD) tandem (MS2) mass spectrometry, Thermo Scientific QExactive HF mass spectrometer, Xcalibur Software (version 3.0.63).

Techniques: Mass Spectrometry, Software, Isolation, Quantitation Assay, Liquid Chromatography, Clinical Proteomics, Isotope Dilution, Chromatography